Bicocca Open Archive

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GRAUDENZI, ALEX
 Distribuzione geografica
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Continente #
NA - Nord America 11.257
EU - Europa 5.507
AS - Asia 1.207
SA - Sud America 12
Continente sconosciuto - Info sul continente non disponibili 7
AF - Africa 4
OC - Oceania 4
Totale 17.998
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Nazione #
US - Stati Uniti d'America 11.117
DE - Germania 2.143
IT - Italia 1.429
CN - Cina 596
IE - Irlanda 578
SE - Svezia 501
UA - Ucraina 211
VN - Vietnam 181
HK - Hong Kong 149
GB - Regno Unito 144
CA - Canada 137
SG - Singapore 128
DK - Danimarca 125
FI - Finlandia 80
RU - Federazione Russa 67
FR - Francia 57
CH - Svizzera 52
IN - India 51
NL - Olanda 36
TR - Turchia 35
BE - Belgio 28
ID - Indonesia 25
IR - Iran 20
JP - Giappone 11
PL - Polonia 10
ES - Italia 9
AT - Austria 8
CZ - Repubblica Ceca 6
BR - Brasile 5
CL - Cile 5
EU - Europa 5
GR - Grecia 4
HU - Ungheria 4
KR - Corea 4
LU - Lussemburgo 3
MX - Messico 3
PH - Filippine 3
AU - Australia 2
EC - Ecuador 2
MK - Macedonia 2
NZ - Nuova Zelanda 2
RO - Romania 2
SC - Seychelles 2
A1 - Anonimo 1
A2 - ???statistics.table.value.countryCode.A2??? 1
BA - Bosnia-Erzegovina 1
BD - Bangladesh 1
BG - Bulgaria 1
EE - Estonia 1
EG - Egitto 1
GN - Guinea 1
IL - Israele 1
IS - Islanda 1
KW - Kuwait 1
LI - Liechtenstein 1
MD - Moldavia 1
SA - Arabia Saudita 1
SI - Slovenia 1
SK - Slovacchia (Repubblica Slovacca) 1
Totale 17.998
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Città #
Ann Arbor 5.712
Frankfurt am Main 2.041
Fairfield 672
Chandler 576
Dublin 567
Woodbridge 549
Wilmington 536
Milan 501
Ashburn 494
Houston 336
Seattle 272
New York 216
Cambridge 212
Dearborn 203
Jacksonville 200
Princeton 161
Hong Kong 143
Dong Ket 128
Boardman 120
Nanjing 118
Shanghai 108
Toronto 71
Lawrence 64
Singapore 63
Beijing 58
San Diego 57
Guangzhou 44
Altamura 41
Sacramento 40
Lachine 35
Nanchang 35
Andover 34
Helsinki 27
Jinan 27
Rome 26
Brussels 25
Jakarta 25
Sesto San Giovanni 23
Tianjin 23
Monza 22
Shenyang 22
Fremont 21
Ottawa 21
Zhengzhou 21
Hebei 20
Falls Church 14
Hangzhou 14
Leiden 14
Melzo 14
Ningbo 14
Turin 14
Changsha 13
Lappeenranta 13
Los Angeles 13
Washington 13
Ardea 12
Bologna 12
Lugano 12
Cernobbio 11
Taizhou 11
Jiaxing 10
Kunming 10
Genoa 9
London 9
Mugnano Di Napoli 9
Norwalk 9
Como 8
Corbetta 8
Florence 8
Lissone 8
Mountain View 8
Napoli 8
Parma 8
Segrate 8
Trieste 8
Triuggio 8
Breganzona 7
Carate Brianza 7
Duncan 7
Phoenix 7
Pregassona 7
Tokyo 7
Valenza 7
Arese 6
Balerna 6
Dallas 6
Desio 6
Kiev 6
Kocaeli 6
Leawood 6
Redmond 6
Torino 6
Vienna 6
Atlanta 5
Changchun 5
Cologno Monzese 5
Edmonton 5
Grafing 5
Haikou 5
Lausanne 5
Totale 15.184
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Nome #
Synchronization effects in a metabolism-driven model of multi-cellular system 474
MaREA4Galaxy: metabolic reaction enrichment analysis and visualization of RNA-seq data using Galaxy 471
Integration of transcriptomic data and metabolic networks in cancer samples reveals highly significant prognostic power 452
Integration of single-cell RNA-seq data into population models to characterize cancer metabolism 451
null 441
Longitudinal cancer evolution from single cells 432
Personalized therapy design for liquid tumors via optimal control theory 419
FBCA, A multiscale modeling framework combining cellular automata and flux balance analysis 416
The Influence of Nutrients Diffusion on a Metabolism-driven Model of a Multi-cellular System 412
Learning mutational graphs of individual tumour evolution from single-cell and multi-region sequencing data 398
Characterization of intra-host SARS-CoV-2 variants improves phylogenomic reconstruction and may reveal functionally convergent mutations 382
A review of computational strategies for denoising and imputation of single-cell transcriptomic data 368
TRONCO: An R package for the inference of cancer progression models from heterogeneous genomic data 357
Modeling cumulative biological phenomena with Suppes-Bayes causal networks 351
CAPRI: Efficient Inference of Cancer Progression Models from Cross-sectional Data 349
Integration of single-cell RNA-sequencing data into flux balance cellular automata 349
Design of the TRONCO bioconductor package for TRanslational ONCOlogy 341
Investigating the Compositional Structure Of Deep Neural Networks 336
Efficient computational strategies to learn the structure of probabilistic graphical models of cumulative phenomena 333
Algorithmic methods to infer the evolutionary trajectories in cancer progression 331
Structural Learning of Probabilistic Graphical Models of Cumulative Phenomena 320
VERSO: a comprehensive framework for the inference of robust phylogenies and the quantification of intra-host genomic diversity of viral samples 319
SpidermiR: An R/bioconductor package for integrative analysis with miRNA data 313
cyTRON and cyTRON/JS: two Cytoscape-based applications for the inference of cancer evolution models 311
An Optimal Control Framework for the Automated Design of Personalized Cancer Treatments 295
A closed-loop optimization framework for personalized cancer therapy design 294
CABeRNET: A Cytoscape app for augmented Boolean models of gene regulatory NETworks 293
Pathway-based classification of breast cancer subtypes 291
VERSO:A COMPREHENSIVE FRAMEWORK FOR THE INFERENCE OF ROBUST PHYLOGENIES AND THE QUANTIFICATION OF INTRA-HOST GENOMIC DIVERSITY OF VIRAL SAMPLES 281
Cognac: A chaste plugin for the multiscale simulation of gene regulatory networks driving the spatial dynamics of tissues and cancer 272
Ordering cancer mutational profiles of cross-sectional copy number alterations 271
Understanding deep learning with activation pattern diagrams 267
A Computational Framework To Infer The Order Of Accumulating Mutations In Individual Tumors 261
On the use of topological features of metabolic networks for the classification of cancer samples 253
A computational framework to infer the order of accumulating mutations in individual tumors 231
Modeling Spatio-Temporal Dynamics of Metabolic Networks with Cellular Automata and Constraint-Based Methods 223
LACE: Inference of cancer evolution models from longitudinal single-cell sequencing data 216
VirMutSig: Discovery and assignment of viral mutational signatures from sequencing data 204
Inferring Tree Causal Models of Cancer Progression with Probability Raising 190
Combining multi-target regression deep neural networks and kinetic modeling to predict relative fluxes in reaction systems 189
Variant calling from scRNA-seq data allows the assessment of cellular identity in patient-derived cell lines 183
Recent developments in research on catalytic reaction networks 177
PMCE: efficient inference of expressive models of cancer evolution with high prognostic power 177
A model of protocell based on the introduction of a semi-permeable membrane in a stochastic model of catalytic reaction networks 176
GeStoDifferent: A Cytoscape plugin for the generation and the identification of gene regulatory networks describing a stochastic cell differentiation process 170
Investigating the Role of Network Topology and Dynamical Regimes on the Dynamics of a Cell Differentiation Model 170
Distributed delays in a hybrid model of tumor-Immune system interplay 168
Large-Scale Analysis of SARS-CoV-2 Synonymous Mutations Reveals the Adaptation to the Human Codon Usage During the Virus Evolution 165
Analysis of the spatial and dynamical properties of a multiscale model of intestinal crypts 162
OG-SPACE: Optimized Stochastic Simulation of Spatial Models of Cancer Evolution 160
On RAF Sets and Autocatalytic Cycles in Random Reaction Networks 155
Preface - Proc. Wivace 2013 - Italian Workshop on Artificial Life and Evolutionary Computation 139
Effects of delayed immune-response in tumor immune-system interplay 136
Investigating the relation between stochastic differentiation and homeostasis in intestinal crypts via multiscale modeling 133
A stochastic model of the emergence of autocatalytic cycles 130
How critical random boolean networks may be affected by the interaction with others 129
Ordering copy number alteration data to analyze colorectal cancer progression 126
Parameter sensitivity analysis of stochastic models: Application to catalytic reaction networks 124
A stochastic model of autocatalytic reaction networks 123
Inferring causal models of cancer progression with a shrinkage estimator and probability raising 122
Dynamical properties of a Boolean model of gene regulatory network with memory 122
Growth and division in a dynamic protocell model 119
The diffusion of perturbations in a model of coupled random boolean networks 117
Mutational signatures and heterogeneous host response revealed via large-scale characterization of SARS-CoV-2 genomic diversity 117
Chemotherapy after PD-1 inhibitors in relapsed/refractory Hodgkin lymphoma: Outcomes and clonal evolution dynamics 117
The role of backward reactions in a stochastic model of catalytic reaction networks 116
A review of spatial computational models for multi-cellular systems, with regard to intestinal crypts and colorectal cancer development 115
Natural Computing: Preface 108
A multiscale model of intestinal crypts dynamics 107
A stochastic model of catalytic reaction networks in protocells 106
The simulation of gene knock-out in scale-free random boolean models of genetic networks 101
Investigating Cell Criticality 99
The detection of dynamical organization in cancer evolution models 97
The influence of different kinetic rates on the dynamics of a simple model of catalytic reaction network 96
Why a simple model of genetic regulatory networks describes the distribution of avalanches in gene expression data 95
Robustness analysis of a boolean model of gene regulatory network with memory 90
The influence of the residence time on the dynamics of catalytic reaction networks of molecules 85
J-SPACE: a Julia package for the simulation of spatial models of cancer evolution and of sequencing experiments 84
The role of energy in a stochastic model of the emergence of autocatalytic sets 82
SparseSignatures: An R package using LASSO-regularized non-negative matrix factorization to identify mutational signatures from human tumor samples 77
Methods, computer-accessible medium and systems to model disease progression using biomedical data from multiple patients 71
Early detection and improved genomic surveillance of SARS-CoV-2 variants from deep sequencing data 70
LACE 2.0: an interactive R tool for the inference and visualization of longitudinal cancer evolution 68
Characterization of SARS-CoV-2 Mutational Signatures from 1.5+ Million Raw Sequencing Samples 67
Comunicazione cellulare, livelli e strutture ordinate 64
Unity is strength: Improving the detection of adversarial examples with ensemble approaches 58
Characterization of cancer subtypes associated with clinical outcomes by multi-omics integrative clustering 48
Evolutionary signatures of human cancers revealed via genomic analysis of over 35,000 patients 42
Exploring the Solution Space of Cancer Evolution Inference Frameworks for Single-Cell Sequencing Data 28
A Bayesian method to infer copy number clones from single-cell RNA and ATAC sequencing 18
MaREA: Metabolic feature extraction, enrichment and visualization of RNAseq data 4
Totale 18.770
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Categoria #
all - tutte 50.760
article - articoli 0
book - libri 0
conference - conferenze 0
curatela - curatele 0
other - altro 0
patent - brevetti 0
selected - selezionate 0
volume - volumi 0
Totale 50.760
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Totale Lug Ago Sett Ott Nov Dic Gen Feb Mar Apr Mag Giu
2019/20202.428 245 102 131 206 193 272 356 247 239 193 158 86
2020/20213.338 72 135 216 256 218 239 240 282 402 406 373 499
2021/20224.678 404 360 394 348 296 406 502 429 328 322 444 445
2022/20234.001 685 984 559 559 320 314 67 145 183 82 69 34
2023/20242.107 73 113 175 75 206 514 446 92 105 44 48 216
2024/20255 5 0 0 0 0 0 0 0 0 0 0 0
Totale 18.770