Bicocca Open Archive

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BONATI, LAURA
 Distribuzione geografica
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Continente #
NA - Nord America 7.310
EU - Europa 3.628
AS - Asia 1.505
SA - Sud America 22
AF - Africa 11
Continente sconosciuto - Info sul continente non disponibili 6
OC - Oceania 5
Totale 12.487
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Nazione #
US - Stati Uniti d'America 7.158
DE - Germania 788
IT - Italia 784
CN - Cina 594
SE - Svezia 487
SG - Singapore 387
IE - Irlanda 381
UA - Ucraina 314
RU - Federazione Russa 303
HK - Hong Kong 167
GB - Regno Unito 166
CA - Canada 151
VN - Vietnam 127
FR - Francia 109
FI - Finlandia 102
IN - India 98
TR - Turchia 35
DK - Danimarca 32
ID - Indonesia 32
PL - Polonia 30
BE - Belgio 28
AT - Austria 22
NL - Olanda 20
ES - Italia 17
BR - Brasile 14
KR - Corea 13
IR - Iran 12
JP - Giappone 11
CH - Svizzera 10
CL - Cile 7
HU - Ungheria 7
LK - Sri Lanka 7
PT - Portogallo 6
EU - Europa 5
PK - Pakistan 5
AU - Australia 4
NO - Norvegia 4
RO - Romania 4
BG - Bulgaria 3
MY - Malesia 3
PH - Filippine 3
SK - Slovacchia (Repubblica Slovacca) 3
ZA - Sudafrica 3
CZ - Repubblica Ceca 2
GR - Grecia 2
IL - Israele 2
SA - Arabia Saudita 2
SC - Seychelles 2
SI - Slovenia 2
TN - Tunisia 2
A2 - ???statistics.table.value.countryCode.A2??? 1
AM - Armenia 1
AR - Argentina 1
BD - Bangladesh 1
EG - Egitto 1
HR - Croazia 1
IQ - Iraq 1
KW - Kuwait 1
MA - Marocco 1
MN - Mongolia 1
MU - Mauritius 1
MX - Messico 1
NG - Nigeria 1
NZ - Nuova Zelanda 1
RS - Serbia 1
TJ - Tagikistan 1
TW - Taiwan 1
Totale 12.487
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Città #
Ann Arbor 1.537
Woodbridge 638
Chandler 606
Fairfield 594
Frankfurt am Main 489
Houston 455
Ashburn 370
Dublin 365
Wilmington 358
Jacksonville 353
Singapore 315
Milan 295
Dearborn 243
Seattle 225
Cambridge 206
New York 167
Santa Clara 167
Princeton 164
Hong Kong 162
Shanghai 154
Nanjing 116
Dong Ket 78
Lachine 59
Beijing 55
Altamura 54
Lawrence 52
San Diego 41
Helsinki 40
Ottawa 38
Andover 31
Boardman 30
Jakarta 28
Kraków 27
Brussels 26
Edmonton 24
Nanchang 24
Shenyang 24
Falls Church 23
Fremont 23
Tianjin 23
Guangzhou 22
Hebei 21
Pune 21
Vienna 21
Toronto 19
Gavirate 18
Jinan 18
Changsha 17
Mountain View 17
Jiaxing 16
Huizen 15
Grafing 14
London 14
Nürnberg 14
Rome 14
Norwalk 13
Barcelona 12
Pioltello 12
Catania 11
Parabiago 11
Washington 10
Bologna 9
Chicago 9
Kunming 9
Los Angeles 8
Montréal 8
Uppsala 8
Zhengzhou 8
Auburn Hills 7
Colombo 7
Hangzhou 7
Maccagno 7
Perugia 7
Ancona 6
Budapest 6
Gangnam-gu 6
Langenfeld 6
Lissone 6
Munich 6
Portsmouth 6
Redmond 6
University Park 6
Amadora 5
Casavatore 5
Fuzhou 5
Kiev 5
Ningbo 5
Pittsburgh 5
Sacramento 5
Bergamo 4
Berkeley 4
Dallas 4
Edinburgh 4
Miami 4
Monza 4
New Delhi 4
Philadelphia 4
Porto Torres 4
Romola 4
Tappahannock 4
Totale 9.236
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Nome #
Molecular modeling of the AhR structure and interactions can shed light on ligand-dependent activation and transformation mechanisms 423
Modeling the binding of diverse ligands within the Ah receptor ligand binding domain 357
Exploring the PXR ligand binding mechanism with advanced Molecular Dynamics methods 351
Ligand-induced perturbation of the HIF-2α:ARNT dimer dynamics 344
Functional annotation of the mesophilic-like character of mutants in a cold-adapted enzyme by self-organising map analysis of their molecular dynamics 337
Modeling Binding with Large Conformational Changes: Key Points in Ensemble-Docking Approaches 300
Role of dynamics in ligand-protein interactions: modelling of binding to the pregnane x receptor 258
Docking to homology models highlights the molecular determinants of ligand binding to the AhR 244
A selected bibliography on PCDD and PCDF formation 224
Complementarietà di metodi di modellistica molecolare e di bioinformatica strutturale nello studio di struttura e funzione di proteine 209
Computational approaches to shed light on molecular mechanisms in biological processes 184
Design of gliadin peptide analogues with low affinity for the celiac disease associated HLA–DQ2 protein 184
Chemometric approaches in environmental problems concerning PCDD and PCDF. Data interpretation and source correlation. Mechanisms of formation and destruction in MSW combustion process. 181
The combustion of Municipal Solid Wastes and PCDD and PCDF emissions. Part. 1 PCDD and PCDF in MSW 181
Self organizing maps to efficiently cluster and functionally interpret protein conformational ensembles 180
Ginsenosides are novel naturally-occurring aryl hydrocarbon receptor ligands 176
Structural modeling of the AhR:ARNT complex in the bHLH–PASA–PASB region elucidates the key determinants of dimerization 172
In vitro toxicity and in silico docking analysis of two novel selective AH-receptor modulators 171
Ligand binding and activation of the Ah receptor 170
Artificial Neural Networks for Efficient Clustering of Conformational Ensembles and their Potential for Medicinal Chemistry 169
Comparative in vitro and in silico analysis of the selectivity of indirubin as a human ah receptor agonist 169
Detecting similarities among distant homologous proteins by comparison of domain flexibilities 167
AHR Ligands: Promiscuity in Binding and Diversity in Response 167
The combustion of Municipal Solid Wastes and PCDD and PCDF emissions. Part. 2 PCDD and PCDF in Stack Gases 167
The combustion of municipal solid wastes: PCDD and PCDF in MSW in emissions. A chemometric approach. 161
On the choice of the perturbed state for PMO prediction of selectivities in cycloaddition reactions 161
Toward a mechanistic understanding of PCDD biological activity based on molecular electrostatic potential modeling 158
The toxicity equivalency factor scheme applied to municipal incinerator PCDD/PCDF emissions when specific congener information is lacking 158
An aryl hydrocarbon receptor from the salamander ambystoma mexicanum exhibits low sensitivity to 2,3,7,8-tetrachlorodibenzo -p -dioxin 158
NURA: A curated dataset of nuclear receptor modulators 158
Conformational and functional analysis of molecular dynamics trajectories by Self-Organising Maps 156
No dance, no partner! A tale of receptor flexibility in docking and virtual screening 155
New Aryl Hydrocarbon Receptor Homology Model Targeted To Improve Docking Reliability 150
Computational prediction and in vitro validation of VEGFR1 as a novel protein target for 2,3,7,8-tetrachlorodibenzo-p-dioxin 149
Conservation and specialization in PAS domain dynamics 147
Molecular electrostatic potentials of substituted aromatic compounds: factors affecting the differences between ab initio and semiempirical results 147
Deciphering Dimerization Modes of PAS Domains: Computational and Experimental Analyses of the AhR:ARNT Complex Reveal New Insights Into the Mechanisms of AhR Transformation 147
Evidence that ligand binding is a key determinant of Ah receptor-mediated transcriptional activity 146
MinSet: a general approach to derive maximally representative database subsets by using fragment dictionaries and its application to the SCOP database 146
Structural and Functional Characterization of the Aryl Hydrocarbon Receptor Ligand Binding Domain by Homology Modeling and Mutational Analysis 144
Identification of potential aryl hydrocarbon receptor ligands by virtual screening of industrial chemicals 144
Predicting the accuracy of protein-ligand docking on homology models 143
Specific Ligand Binding Domain Residues Confer Low Dioxin Responsiveness to AHR1β of Xenopus laevis 142
Predicting the accuracy of protein-ligand docking on homology models 141
On the role of the molecular electrostatic potential in modelling the activity of non peptide angiotensin II receptor antagonists 140
Ligand docking in AhR homology model: specificity of structurally diverse ligands interactions 140
Detection of the TCDD binding-fingerprint within the Ah receptor ligand binding domain by structurally driven mutagenesis and functional analysis 138
Comparative Analysis of Homology Models of the Ah Receptor Ligand Binding Domain: Verification of Structure-Function Predictions by Site-Directed Mutagenesis of a Nonfunctional Receptor 137
A new methodology for the comparison of protein dynamics based on self-organizing maps 136
Extension of a PMO model to study the regioselectivity in 1,3 dipolar cycloadditions: reactions of 3,5 dichloro 2,4,6 trimethyl benzonitrile oxide with heteroaromatic systems 136
ZADDOCK: incorporating ab initio search into HADDOCK 135
Unraveling PPI hot spots for PAS domains dimerization: the case of Aryl hydrocarbon Receptor 135
A comparative analysis of molecular electrostatic potentials of chlorinated dibenzo p dioxins in relation to their biological activity 132
Binding specificity of diverse AhR ligands interpreted by Molecular Modeling 130
Estimation of the toxicity equivalents of PCDD/PCDF mixtures when specific congener information is lacking: a preliminary study 125
Structural and Functional Characterization of PAS Domain Dimers: the Aryl Hydrocarbon Receptor Paradigm 124
Defining the limits of homology modeling in information-driven protein docking 121
Transitional States in Ligand-Dependent Transformation of the Aryl Hydrocarbon Receptor into Its DNA-Binding Form 121
Comparison of protein flexibilities: a study case on wild type and mutants of the SH3 domain 117
Functional interpretation of protein conformational ensembles using self-organizing maps and network components 115
BioPySDS: an Object-Oriented Interface to Manage Protein Dynamics in an Evolutionary Framework 112
Conformational selection and induced fit roles in ensemble docking applications 110
An Aryl Hydrocarbon Receptor Sequence from the Caecilian Gymnopis multiplicata Exhibits Low Responsiveness to 2,3,7,8-tetrachlorodibenzo-p-dioxin 104
Metadynamics-Based Approaches for Modeling the Hypoxia-Inducible Factor 2α Ligand Binding Process 103
A Neural Network Approach for the Identification of Pathways in Molecular Dynamics Simulations of Ligand Binding 103
Selezione di riferimenti bibliografici relativi alla formazione di PCDD e PCDF 102
Intermolecular interactions that determine the regioselectivity in 1,3‐dipolar cycloadditions of N‐methyl‐1,3‐oxazolium‐5‐olates with N‐(phenylmethylene)benzenesulphonamide 101
Functional annotation of protein conformations by Self-Organizing Maps 100
Deciphering the ahr:arnt dimerization process: how to assembly the functional puzzle of interacting interfaces 99
Unraveling Dimerization Interfaces of PAS Domain Dimers: Lessons from the AhR/ARNT Complex. 97
Structural characterization of insect trehalase and assessment of potential inhibitors 97
Testing structure-binding predictions from comparative modeling of the AHR ligand-binding domain: Studies with zebrafish AHR1a 95
La combustione dei rifiuti solidi urbani e le emissioni di PCDD e PCDF 89
Modelling the intertwined network of ppis along the ahr:arnt dimer 86
Reconstruction of ARNT PAS-B Unfolding Pathways by Steered Molecular Dynamics and Artificial Neural Networks 84
Unveiling the inhibition mechanism of HIF-2α:ARNT dimerization by protein dynamics investigation 83
Study of ligand binding to HIF-2α through Path-Metadynamics 82
Modelling ligands/Aryl hydrocarbon Receptor binding interactions 80
Specific amino acid residues within the ligand binding domain confer low responsiveness to 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) to an aryl hydrocarbon receptor (AHR) from the frog Xenopus Laevis 80
The cellular and molecular determinants of naphthoquinone-dependent activation of the aryl hydrocarbon receptor 73
Modeling of Ligand Binding to the HIF-2α Protein with Enhanced Sampling Methods 69
Metadynamics simulations for the investigation of drug loading on functionalized inorganic nanoparticles 64
An aryl hydrocarbon receptor from the caecilian Gymnopis multiplicata suggests low dioxin affinity in the ancestor of all three amphibian orders 57
Mechanism of a nanodevice binding to its target protein by atomistic molecular dynamics: the case of RGD-conjugated PEGylated TiO2 nanoparticles binding to integrins αVβ3 51
Mechanism of RGD-conjugated nanodevice binding to its target protein integrin αVβ3 by atomistic molecular dynamics and machine learning 47
PathDetect-SOM: A Neural Network Approach for the Identification of Pathways in Ligand Binding Simulations 44
Molecular Dynamics for the Optimal Design of Functionalized Nanodevices to Target Folate Receptors on Tumor Cells 42
Molecular Dynamics for the Optimal Design of Functionalized Nanodevices to Target Folate Receptors on Tumor Cells 42
Drug Design in the Exascale Era: A Perspective from Massively Parallel QM/MM Simulations 32
TCDD-Induced Allosteric Perturbation of the AhR:ARNT Binding to DNA 29
Aryl Hydrocarbon Receptor-Dependent and-Independent Pathways Mediate Curcumin Anti-Aging Effects 27
The AhR Signaling Mechanism: A Structural Point of View 16
Self-organizing maps of unbiased ligand-target binding pathways and kinetics 11
Totale 12.989
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Categoria #
all - tutte 41.520
article - articoli 0
book - libri 0
conference - conferenze 0
curatela - curatele 0
other - altro 0
patent - brevetti 0
selected - selezionate 0
volume - volumi 0
Totale 41.520
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Totale Lug Ago Sett Ott Nov Dic Gen Feb Mar Apr Mag Giu
2019/20201.465 0 0 0 0 202 249 320 139 193 180 133 49
2020/20211.655 100 78 159 174 115 106 142 135 145 175 100 226
2021/20221.127 80 147 149 82 34 88 65 27 58 89 111 197
2022/20232.285 208 624 242 215 179 347 29 138 164 15 59 65
2023/20241.556 74 75 74 98 179 362 294 68 97 25 39 171
2024/20251.167 196 356 179 196 240 0 0 0 0 0 0 0
Totale 12.989